BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C09LP1|AL427462
(479 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 889 0.0
>3x_Contig1619
Length = 7770
Score = 889 bits (448), Expect = 0.0
Identities = 465/472 (98%)
Strand = Plus / Minus
Query: 8 ctatttgatattgggcgctcgtggataaattattgttaacctaactcattatctagtcgt 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 ctatttgatattgggcgctcgtggataaattattgttaacctaactcattatctagtcgt 1298
Query: 68 tgaacgtttttataactccccacgcggcatcgaaaaaccgtaggtntggacgagccgcgt 127
|||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 1297 tgaacgtttttataactccccacgcggcatcgtctaaccgtagggttggacgagccgcgt 1238
Query: 128 ggggttattatataataatataatawaggttgttataaacttcgctgcaaattgtccata 187
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1237 ggggttattatataataatataatataggttgttataaacttcgctgcaaattgtccata 1178
Query: 188 tttaatataattattaaatactaggagtttcttgcaattcacccaattttatattctaat 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1177 tttaatataattattaaatactaggagtttcttgcaattcacccaattttatattctaat 1118
Query: 248 tatatcccataatcttaataagattatgggataaataagaaaaataggactcactcttta 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1117 tatatcccataatcttaataagattatgggataaataagaaaaataggactcactcttta 1058
Query: 308 tcctaaaattgcgaatgggaataatgtatcttttaatgatgggtttcttgatactccttg 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1057 tcctaaaattgcgaatgggaataatgtatcttttaatgatgggtttcttgatactccttg 998
Query: 368 aattaaggctgagaatacgatagcaataccaatacctgctcctaataatccaattgttga 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 997 aattaaggctgagaatacgatagcaataccaatacctgctcctaataatccaattgttga 938
Query: 428 gatacctgctccaatatatttagctgctaatactaattgcatgttatntata 479
||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 937 gatacctgctccaatatatttagctgctaatactaattgcatgttatttata 886
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3679
Number of Sequences: 1807
Number of extensions: 3679
Number of successful extensions: 110
Number of sequences better than 1.0e-20: 1
length of query: 479
length of database: 10,358,551
effective HSP length: 16
effective length of query: 463
effective length of database: 10,329,639
effective search space: 4782622857
effective search space used: 4782622857
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)